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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815476.1_cds_XP_016498345.1_12380
CDS Infomation

[gene=LOC107817083] [db_xref=GeneID:107817083] [protein=stromal 70 kDa heat shock-related protein, chloroplastic] [protein_id=XP_016498345.1] [location=join(76609..77160,77975..78227,78642..78721,78836..78978,79076..79174,79285..79474,79552..79950,80200..80607)] [gbkey=CDS]
Sequence

ATGGCGTCTTCAACAGCTCAAATTCACGCTGTTGGAGCCACATATTTTACAACTTCCTCT
TCTTCCAGTAGAAAACCCTCAAAGACAGTGTTTTTAGGTCAAAACATAAACAACAGAACC
CTAGCGTTCGGATTGAAGCAGAAGAAGAGCAGCTTCAGCCGGAGGAATGGCGGTGGTCAC
GCGCCACTGCGTGTGGTGGCGGAGAAGGTGGTGGGAATTGACTTGGGGACCACCAATTCC
GCCGTGGCTGCTATGGAAGGAGGGAAGCCCACCATAGTGACCAACGCTGAAGGGCAGAGG
ACAACACCTTCAGTGGTGGCTTATACTAAGAATGGGGATAGGCTTGTCGGGCAAATTGCG
AAGCGTCAGGCTGTGGTGAACCCGGAGAATACCTTCTTTTCGGTGAAGAGATTCATAGGG
AGGAAAATGAATGAGGTGGATGAGGAGTCGAAGCAGGTCTCGTACAATGTTATTAGAGAT
GAGAATGGAAACGTCAAGCTGGATTGCCCTGCCATTGGCAAATCATTCGCCGCTGAAGAA
ATTTCAGCTCAGGTCTTGAGGAAGTTGGTGGATGACGCATCCAAATTTTTGAATGACAAG
GTTTCCAAGGCTGTTGTCACTGTTCCTGCATACTTCAATGATTCTCAGAGGACAGCAACA
AAGGATGCCGGTCGCATTGCTGGATTAGAGGTTCTCCGGATAATTAATGAACCAACTGCT
GCCTCCCTGGCTTATGGTTTTGAAAAGAAGAACAATGAAACTATTTTGGTTTTTGATCTT
GGAGGTGGTACTTTTGATGTATCAGTTCTTGAGGTTGGTGACGGTGTCTTTGAGGTGTTG
TCTACTTCTGGTGATACCCATCTTGGTGGTGACGATTTTGACAAGAGAATTGTTGATTGG
CTTGCTTCAGATTTCAAGAAGAATGAAGGTATTGATCTTCTGAAGGACAAACAAGCTCTT
CAACGTCTGACTGAGACTGCTGAAAAAGCTAAGATGGAACTGTCATCACTGACACAGACT
AACATCAGTTTACCATTCATCACAGCCACTGCGGATGGTCCTAAACACATTGAGACCACT
ATCACACGTGGTAAATTTGAAGAACTATGCTCAGATCTGCTTGACAGGCTTAAAACTCCT
GTTCAGAATTCCTTGAGAGATGCCAAGCTCTCCTTCAGCGATATTGATGAGGTGATCCTT
GTTGGTGGTTCTACACGTATTCCAGCTGTTCAGGAACTTGTTAAGAAATTGACTGGAAAG
GATCCCAATGTTACAGTAAATCCTGATGAAGTTGTTGCTCTCGGTGCTGCAGTGCAGGCT
GGAGTATTGGCCGGAGATGTCAGTGATATTGTTCTTTTAGATGTCACACCGTTGTCCATT
GGTTTGGAAACACTTGGTGGTGTGATGACAAAGATCATTCCAAGAAATACAACATTGCCT
ACCTCAAAATCAGAAGTATTCTCTACTGCTGCTGATGGTCAGACAAGTGTAGAAATTAAT
GTCCTCCAAGGGGAGCGAGAATTTGTTAGGGATAACAAGTCTTTGGGCAGCTTCCGGCTT
GATGGAATTCCTCCCGCCCCAAGAGGGGTTCCTCAAATTGAAGTGAAATTTGATATTGAT
GCCAATGGCATTCTCTCCGTCACTGCTATTGACAAGGGTACTGGGAAGAAGCAAGACATC
ACCATTACTGGTGCCAGCACATTGCCCGGTGATGAGGTTGAGAGAATGGTTAAAGAAGCT
GAAAGATTCGCCCAGGAAGACAAGGAGAAGAGAGATGCCATAGACACAAAGAACCAGGCC
GATTCTGTTGTCTACCAGACAGAGAAGCAGCTGAAGGAACTTGGAGACAAAGTACCAGGG
CCGGTGAAAGAGAAAGTTGAGGCTAAACTTGGAGAGCTTAAAGAAGCGATCTCAGGGGGC
TCAACTCAAACCATGAAGGATGCGATGGCTTCTCTTAACCAAGAAGTAATGCAGCTTGGT
CAGTCACTCTACAACCAGCCTGGTGCTGGAGCTGCACCAGGTGCTGGTCCGGCACCTGGC
GATTCCGCTGGTCCTTCAGAATCATCATCAGGGAAAGGACCTGATGGAGACGTAATCGAT
GCTGATTTCACCGACAGCAAGTGA

Peptide Sequence

PEP ID

XP_016498345.1
PEP Infomation

PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Nicotiana tabacum]
Sequence

MASSTAQIHAVGATYFTTSSSSSRKPSKTVFLGQNINNRTLAFGLKQKKSSFSRRNGGGH
APLRVVAEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIA
KRQAVVNPENTFFSVKRFIGRKMNEVDEESKQVSYNVIRDENGNVKLDCPAIGKSFAAEE
ISAQVLRKLVDDASKFLNDKVSKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTA
ASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDW
LASDFKKNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETT
ITRGKFEELCSDLLDRLKTPVQNSLRDAKLSFSDIDEVILVGGSTRIPAVQELVKKLTGK
DPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLP
TSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDID
ANGILSVTAIDKGTGKKQDITITGASTLPGDEVERMVKEAERFAQEDKEKRDAIDTKNQA
DSVVYQTEKQLKELGDKVPGPVKEKVEAKLGELKEAISGGSTQTMKDAMASLNQEVMQLG
QSLYNQPGAGAAPGAGPAPGDSAGPSESSSGKGPDGDVIDADFTDSK

Transcript Sequence

Gene sequence data has not been registered.